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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
UCEC rs114089587 chr2:221776480 T/G DCD chr12:55038375-55042277:- 0.69 7.3 1.49E-11 Box Plot
UCEC rs114206433 chr2:221776496 G/A DCD chr12:55038375-55042277:- 0.69 7.3 1.49E-11 Box Plot
UCEC rs114892991 chr2:221776337 A/T DCD chr12:55038375-55042277:- 0.69 7.3 1.49E-11 Box Plot
UCEC rs117053465 chr9:32266194 C/A MYF5 chr12:81110691-81113452:+ 0.56 7.01 7.17E-11 Box Plot
UCEC rs11780017 chr8:14881701 C/T KIAA1967 chr8:22462257-22477981:+ 1.03 7.01 7.15E-11 Box Plot
UCEC rs131684 chr22:23646257 A/T POM121L10P chr22:25053448-25054732:- 0.63 7.05 5.98E-11 Box Plot
UCEC rs131686 chr22:23646953 A/T POM121L10P chr22:25053448-25054732:- 0.66 7.82 8.34E-13 Box Plot
UCEC rs131690 chr22:23648009 G/A POM121L10P chr22:25053448-25054732:- 0.66 7.81 8.85E-13 Box Plot
UCEC rs131691 chr22:23648625 T/C POM121L10P chr22:25053448-25054732:- 0.64 7.52 4.39E-12 Box Plot
UCEC rs131693 chr22:23649242 T/G POM121L10P chr22:25053448-25054732:- 0.66 7.81 8.86E-13 Box Plot
UCEC rs1323135 chr20:1357852 A/C FKBP1AP1 chr19:58337829-58338146:- -0.63 -7.62 2.5E-12 Box Plot
UCEC rs1329583 chr9:32316266 C/G MYF5 chr12:81110691-81113452:+ -0.5 -7.15 3.4E-11 Box Plot
UCEC rs1329584 chr9:32316362 G/A MYF5 chr12:81110691-81113452:+ -0.5 -7.15 3.4E-11 Box Plot
UCEC rs1329585 chr9:32317994 A/C MYF5 chr12:81110691-81113452:+ -0.59 -8.02 2.6E-13 Box Plot
UCEC rs13296 chr6:44218120 A/G HSP90AB2P chr4:13335038-13340281:+ 0.74 11.35 5.16E-22 Box Plot